Mappings between probabilistic Boolean networks
نویسندگان
چکیده
Probabilistic Boolean Networks (PBNs) comprise a graphical model based on uncertain rule-based dependencies between nodes and have been proposed as a model for genetic regulatory networks. As with any algebraic structure, the characterization of important mappings between PBNs is critical for both theory and application. This paper treats the construction of mappings to alter PBN structure while at the same time maintaining consistency with the original probability structure. It considers projections onto sub-networks, adjunctions of new nodes, resolution reduction mappings formed by merging nodes, and morphological mappings on the graph structure of the PBN. It places PBNs in the framework of many-sorted algebras and in that context de5nes homomorphisms between PBNs. ? 2002 Elsevier Science B.V. All rights reserved.
منابع مشابه
Reduction Mappings between Probabilistic Boolean Networks
Probabilistic Boolean networks (PBNs) comprise a model describing a directed graph with rule-based dependences between its nodes. The rules are selected, based on a given probability distribution which provides a flexibility when dealing with the uncertainty which is typical for genetic regulatory networks. Given the computational complexity of the model, the characterization of mappings reduci...
متن کاملProbabilistic Boolean Networks - The Modeling and Control of Gene Regulatory Networks
probabilistic boolean networks the modeling and control of probabilistic boolean networks the modeling and control of probabilistic boolean networks: the modeling and control probabilistic boolean networks society for industrial probabilistic boolean networks the modeling and control of probabilistic control of boolean networks with multiple from boolean to probabilistic boolean networks as mod...
متن کاملProbabilistic Ontological Data Exchange with Bayesian Networks
We study the problem of exchanging probabilistic data between ontology-based probabilistic databases. The probabilities of the probabilistic source databases are compactly encoded via Boolean formulas with the variables adhering to the dependencies imposed by a Bayesian network, which are closely related to the management of provenance. For the ontologies and the ontology mappings, we consider ...
متن کاملBoolean Models of Genomic Regulatory Networks: Reduction Mappings, Inference, and External Control
Computational modeling of genomic regulation has become an important focus of systems biology and genomic signal processing for the past several years. It holds the promise to uncover both the structure and dynamical properties of the complex gene, protein or metabolic networks responsible for the cell functioning in various contexts and regimes. This, in turn, will lead to the development of o...
متن کاملProbabilistic Boolean networks: a rule-based uncertainty model for gene regulatory networks
MOTIVATION Our goal is to construct a model for genetic regulatory networks such that the model class: (i) incorporates rule-based dependencies between genes; (ii) allows the systematic study of global network dynamics; (iii) is able to cope with uncertainty, both in the data and the model selection; and (iv) permits the quantification of the relative influence and sensitivity of genes in their...
متن کاملذخیره در منابع من
با ذخیره ی این منبع در منابع من، دسترسی به آن را برای استفاده های بعدی آسان تر کنید
برای دانلود متن کامل این مقاله و بیش از 32 میلیون مقاله دیگر ابتدا ثبت نام کنید
ثبت ناماگر عضو سایت هستید لطفا وارد حساب کاربری خود شوید
ورودعنوان ژورنال:
- Signal Processing
دوره 83 شماره
صفحات -
تاریخ انتشار 2003